BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012C06LP1|AL426337
(786 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1491 1046 0.0
3x_Contig1414 508 e-144
>3x_Contig1491
Length = 9571
Score = 1046 bits (527), Expect = 0.0
Identities = 544/550 (98%), Gaps = 1/550 (0%)
Strand = Plus / Plus
Query: 1 ggttgttattccagcacccgcaaaatcagcattgcaagcaaatraaagtcgatccacagc 60
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 9019 ggttgttattccagcacccgcaaaatccgcattgcaagcaaatgaaagtcgatccacagc 9078
Query: 61 taatttcaccaaaatccatacatctcatggttctcatagttctattcttgaagtctgcgt 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9079 taatttcaccacaatccatacatctcatggttctcatagttctattcttgaagtctgcgt 9138
Query: 121 ggcgaas-agatatcgtaccgtttcgcattctttcaacactgcgtcaccaagcttttggt 179
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9139 ggcgaagcagatatcgtaccgtttcgcattctttcaacactgcgtcaccaagcttttggt 9198
Query: 180 tagaaaccacttgattcatatgcggacaaaccataactaataaaaaaaattttggccaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9199 tagaaaccacttgattcatatgcggacaaaccataactaataaaaaaaattttggccaag 9258
Query: 240 cacacgcacgagcactgagaaatttcagaaaaatatctagctgaagttccctgctcgagc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9259 cacacgcacgagcactgagaaatttcagaaaaatatctagctgaagttccctgctcgagc 9318
Query: 300 tagaggatgactaaggcacaaagactttgctccgtttccccaaaaattgtaactgaatct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9319 tagaggatgactaaggcacaaagactttgctccgtttccccaaaaattgtaactgaatct 9378
Query: 360 gattactagatcatcatctgttagagtgcgaatttcatataatgaaaagttaaacagaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9379 gattactagatcatcatctgttagagtgcgaatttcatataatgaaaagttaaacagaaa 9438
Query: 420 aaacttgatccagaatcaagcaaaaaaatgaaaaagcgaaaaataaaaggaagaaatgat 479
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 9439 aaacttgatccagaatcaagcaaaaaaatgaaaaagcgaaaaatanaaggaagaaatgat 9498
Query: 480 acataagtaaacggtagatagtatatacttgtgggagctcagtgtggtcatatacagact 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9499 acataagtaaacggtagatagtatatacttgtgggagctcagtgtggtcatatacagact 9558
Query: 540 actatcagcc 549
||||||||||
Sbjct: 9559 actatcagcc 9568
>3x_Contig1414
Length = 7923
Score = 508 bits (256), Expect = e-144
Identities = 256/256 (100%)
Strand = Plus / Plus
Query: 531 atacagactactatcagccggggtgtttgtaaccatacaggcaaatgagtggaggtgtct 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 atacagactactatcagccggggtgtttgtaaccatacaggcaaatgagtggaggtgtct 63
Query: 591 acaggatctcttatatattattagttttattttttatgagtatcaaaattagcatgtatc 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 acaggatctcttatatattattagttttattttttatgagtatcaaaattagcatgtatc 123
Query: 651 ccgtagtcatccttatgtagtcattttgtactctttctctcgagaggtacctggaaaaac 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ccgtagtcatccttatgtagtcattttgtactctttctctcgagaggtacctggaaaaac 183
Query: 711 cagctgcgtacgaagatttctaggagataatccgattcgcagagaaagagagagagggag 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 cagctgcgtacgaagatttctaggagataatccgattcgcagagaaagagagagagggag 243
Query: 771 agggagctcatcgcaa 786
||||||||||||||||
Sbjct: 244 agggagctcatcgcaa 259
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7185
Number of Sequences: 1807
Number of extensions: 7185
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 2
length of query: 786
length of database: 10,358,551
effective HSP length: 16
effective length of query: 770
effective length of database: 10,329,639
effective search space: 7953822030
effective search space used: 7953822030
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)